BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D06SP1|AL429054
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1473 831 0.0
3x_Contig1099 807 0.0
>3x_Contig1473
Length = 8041
Score = 831 bits (419), Expect = 0.0
Identities = 419/419 (100%)
Strand = Plus / Minus
Query: 1 gatctgatatgaaatccagttttgcaccaattggtctagaacgtggttatgctgggagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gatctgatatgaaatccagttttgcaccaattggtctagaacgtggttatgctgggagca 360
Query: 61 gttgaaaacgaaagaagaaaatcgctaatagtaaacagtaactggccagttagaaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gttgaaaacgaaagaagaaaatcgctaatagtaaacagtaactggccagttagaaaagaa 300
Query: 121 tttaatataaattaccaacgaaatttacttcaattgtgtaagatcaatgtttttagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tttaatataaattaccaacgaaatttacttcaattgtgtaagatcaatgtttttagatca 240
Query: 181 acgtttcagatcaatgcttacctttttcggtttcaatgaggatatatattttttctgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 acgtttcagatcaatgcttacctttttcggtttcaatgaggatatatattttttctgttt 180
Query: 241 ggctttccaataatgtaaatagctaaaaaaaacagatcgccccaagattagatgataacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggctttccaataatgtaaatagctaaaaaaaacagatcgccccaagattagatgataacc 120
Query: 301 tatcagaaagagaaacaagaggtcagtattgctagctacagtgagggatctttggccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tatcagaaagagaaacaagaggtcagtattgctagctacagtgagggatctttggccaaa 60
Query: 361 ttattaaaatatagctaggatactgatttattctttcaattatttggtggaagtcagca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 ttattaaaatatagctaggatactgatttattctttcaattatttggtggaagtcagca 1
>3x_Contig1099
Length = 3902
Score = 807 bits (407), Expect = 0.0
Identities = 414/415 (99%), Gaps = 1/415 (0%)
Strand = Plus / Plus
Query: 515 agctttttacattgagatattctaagagacaattgagattgcggcttctcttgacttttg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctttttacattgagatattctaagagacaattgagattgcggcttctcttgacttttg 60
Query: 575 gattagtacagcatcagccaagacaagggcagccattgcttccacaattggggtggctct 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattagtacagcatcagccaagacaagggcagccattgcttccacaattggggtggctct 120
Query: 635 tggggtgacagaagggtcgtgtctacctttagcagctagaataccagatttaccgtcgta 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggggtgacagaagggtcgtgtctacctttagcagctagaataccagatttaccgtcgta 180
Query: 695 ggtagcagtagcttgttcttgagaaatagtagctgcagatttgaaaggtacagagaagta 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtagcagtagcttgttcttgagaaatagtagctgcagatttgaaaggtacagagaagta 240
Query: 755 gatgttttctccatttgagataccaccttgaataccaccagagttgttcgtctttgttct 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgttttctccatttgagataccaccttgaataccaccagagttgttcgtctttgttct 300
Query: 815 tagtcttccggtgtcctcatcgaagtagaagggatcgttatgcttagaacctggcaaaca 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtcttccggtgtcctcatcgaagtagaagggatcgttatgcttagaacctggcaaaca 360
Query: 875 aacgccatcgaatccggaaccaatctcgaaacccttkggaagctgggattgagag 929
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 aacgccatcgaatccggaaccaatctcgaaaccctt-ggaagctgggattgagag 414
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7771
Number of Sequences: 1807
Number of extensions: 7771
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)